diff --git a/bin/lib/create.js b/bin/lib/create.js
index 8025a0b6..c4e72f6f 100755
--- a/bin/lib/create.js
+++ b/bin/lib/create.js
@@ -165,17 +165,23 @@ exports.createProject = function(project_path, package_name, project_name, proje
             // copy project template
             shell.cp('-r', path.join(project_template_dir, 'assets'), project_path);
             shell.cp('-r', path.join(project_template_dir, 'res'), project_path);
+            shell.cp('-r', path.join(ROOT, 'framework', 'res', 'xml'), path.join(project_path, 'res'));
+
             // Manually create directories that would be empty within the template (since git doesn't track directories).
             shell.mkdir(path.join(project_path, 'libs'));
+
             // Add in the proper eclipse project file.
             if (use_cli_template) {
+                var note = 'To show `assets/www` or `res/xml/config.xml`, go to:\n' +
+                           '    Project -> Properties -> Resource -> Resource Filters\n' +
+                           'And delete the exclusion filter.\n';
                 shell.cp(path.join(project_template_dir, 'eclipse-project-CLI'), path.join(project_path, '.project'));
+                fs.writeFileSync(path.join(project_path, 'assets', '_where-is-www.txt'), note);
             } else {
                 shell.cp(path.join(project_template_dir, 'eclipse-project'), path.join(project_path, '.project'));
             }
 
-            // copy cordova.js, cordova.jar and res/xml
-            shell.cp('-r', path.join(ROOT, 'framework', 'res', 'xml'), path.join(project_path, 'res'));
+            // copy cordova.js, cordova.jar
             copyJsAndLibrary(project_path, use_shared_project, safe_activity_name);
 
             // interpolate the activity name and package
diff --git a/bin/templates/project/eclipse-project-CLI b/bin/templates/project/eclipse-project-CLI
index 7e438bf6..581b3ab1 100644
--- a/bin/templates/project/eclipse-project-CLI
+++ b/bin/templates/project/eclipse-project-CLI
@@ -32,36 +32,40 @@
 	</natures>
 	<linkedResources>
 		<link>
-			<name>-- Cordova Project --</name>
-			<type>2</type>
-			<locationURI>virtual:/virtual</locationURI>
-		</link>
-		<link>
-                        <name>-- Cordova Project --/config.xml</name>
+                        <name>config.xml</name>
 			<type>1</type>
 			<locationURI>$%7BPARENT-2-PROJECT_LOC%7D/config.xml</locationURI>
 		</link>
                 <link>
-                        <name>-- Cordova Project --/www</name>
+                        <name>www</name>
                         <type>2</type>
 			<locationURI>$%7BPARENT-2-PROJECT_LOC%7D/www</locationURI>
                 </link>
                 <link>
-                        <name>-- Cordova Project --/merges</name>
+                        <name>merges</name>
                         <type>2</type>
 			<locationURI>$%7BPARENT-2-PROJECT_LOC%7D/merges</locationURI>
                 </link>
 	</linkedResources>
-	<filteredResources>
-		<filter>
-			<id>1388696068187</id>
-			<name></name>
-			<type>10</type>
-			<matcher>
-				<id>org.eclipse.ui.ide.multiFilter</id>
-				<arguments>1.0-name-matches-false-true-CordovaLib|platform_www|cordova</arguments>
-			</matcher>
-		</filter>
-	</filteredResources>
+        <filteredResources>
+                <filter>
+                        <id>1390880034107</id>
+                        <name></name>
+                        <type>30</type>
+                        <matcher>
+                                <id>org.eclipse.ui.ide.multiFilter</id>
+                                <arguments>1.0-projectRelativePath-matches-false-true-^(build.xml|ant-gen|ant-build|custom_rules.xml|CordovaLib|platform_www|cordova)</arguments>
+                        </matcher>
+                </filter>
+                <filter>
+                        <id>1390880034108</id>
+                        <name></name>
+                        <type>30</type>
+                        <matcher>
+                                <id>org.eclipse.ui.ide.multiFilter</id>
+                                <arguments>1.0-projectRelativePath-matches-false-true-^(assets/www|res/xml/config.xml)</arguments>
+                        </matcher>
+                </filter>
+        </filteredResources>
 </projectDescription>